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Clinical Microbiology, Department of - a part of Copenhagen University Hospital
  1. 2020
  2. E-pub ahead of print
  3. E-pub ahead of print
  4. E-pub ahead of print

    Impact of Hiv-Related Gut Microbiota Alterations on Metabolic Comorbidities

    Gelpi, M., Vestad, B., Hansen, S. H., Holm, K., Drivsholm, N., Goetz, A., Kirkby, N. S., Lindegaard, B., Lebech, A-M., Hoel, H., Michelsen, A. E., Ueland, T., Gerstoft, J., Lundgren, J., Hov, J. R., Nielsen, S. D. & Trøseid, M., 2 Jan 2020, In : Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. E-pub ahead of print

    Critical evaluation of the appetite test for children with severe acute malnutrition

    Zangenberg, M., Abdissa, A., Johansen, Ø. H., Tesfaw, G., Friis, H., Briend, A., Eshetu, B., Kurtzhals, J. A. L. & Girma, T., 2020, In : Tropical medicine & international health : TM & IH. p. epub

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. E-pub ahead of print

    In vivo imaging of the buccal mucosa shows loss of the endothelial glycocalyx and perivascular hemorrhages in pediatric Plasmodium falciparum malaria

    Lyimo, E., Haslund, L. E., Ramsing, T., Wang, C. W., Efunshile, A. M., Manjurano, A., Makene, V., Lusingu, J., Theander, T. G., Kurtzhals, J. A. L., Paulsen, R. & Hempel, C., 2020, In : Infection and Immunity. p. epub

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. E-pub ahead of print

    Oral amoxicillin and amoxicillin-clavulanate: properties, indications, and usage

    Huttner, A., Bielicki, J., Clements, M. N., Frimodt-Møller, N., Muller, A. E., Paccaud, J-P. & Mouton, J. W., 2020, In : Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases. p. epub

    Research output: Contribution to journalReviewResearchpeer-review

  8. E-pub ahead of print

    The efficacy of topical agents used in wounds for managing chronic biofilm infections: A systematic review

    Schwarzer, S., James, G. A., Goeres, D., Bjarnsholt, T., Vickery, K., Percival, S. L., Stoodley, P., Schultz, G., Jensen, S. O. & Malone, M., 2020, In : Journal of Infection. p. epub

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. 2019
  10. Published
  11. Published
  12. Published
  13. E-pub ahead of print

    Efficacy of mecillinam against clinical multidrug-resistant Escherichia coli in a murine urinary tract infection model

    Zykov, I. N., Frimodt-Møller, N., Småbrekke, L., Sundsfjord, A. & Samuelsen, Ø., 23 Nov 2019, In : International Journal of Antimicrobial Agents. p. epub

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. E-pub ahead of print

    Biofilms of Mycobacterium abscessus complex can be sensitized to antibiotics by disaggregation and oxygenation

    Kolpen, M., Jensen, P. Ø., Qvist, T., Kragh, K. N., Ravnholt, C., Fritz, B. G., Johansen, U. R., Bjarnsholt, T. & Høiby, N., 18 Nov 2019, In : Antimicrobial Agents and Chemotherapy. p. epub

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. E-pub ahead of print

    Genetic relationship between bacteria isolated from intraoperative air samples and surgical site infections at a major teaching hospital in Ghana

    Stauning, M. A., Bediako-Bowan, A., Bjerrum, S., Andersen, L. P., Andreu-Sánchez, S., Labi, A-K., Kurtzhals, J. A. L., Marvig, R. L. & Opintan, J. A., 16 Nov 2019, In : The Journal of hospital infection. p. epub

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    Mode of action of quinoline antimalarial drugs in red blood cells infected by Plasmodium falciparum revealed in vivo

    Kapishnikov, S., Staalsø, T., Yang, Y., Lee, J., Pérez-Berná, A. J., Pereiro, E., Yang, Y., Werner, S., Guttmann, P., Leiserowitz, L. & Als-Nielsen, J., 12 Nov 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 46, p. 22946-22952 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. E-pub ahead of print

    The environmental occurrence of Pseudomonas aeruginosa

    Crone, S., Vives-Flórez, M., Saunders, A. M., Kvich, L., Malone, M., Nicolaisen, M. H., Martínez-García, E., Rojas-Acosta, C., Catalina Gomez-Puerto, M., Calum, H., Whiteley, M., Kolter, R. & Bjarnsholt, T., 10 Nov 2019, In : APMIS - Journal of Pathology, Microbiology and Immunology.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    In Situ Monitoring of the Antibacterial Activity of a Copper-Silver Alloy Using Confocal Laser Scanning Microscopy and pH Microsensors

    Ciacotich, N., Kragh, K. N., Lichtenberg, M., Tesdorpf, J. E., Bjarnsholt, T. & Gram, L., Nov 2019, In : Global challenges (Hoboken, NJ). 3, 11, p. 1900044

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Reconciling Antimicrobial Susceptibility Testing and Clinical Response in Antimicrobial Treatment of Chronic Cystic Fibrosis Lung Infections

    Antimicrobial Resistance International Working Group in Cystic Fibrosis, 30 Oct 2019, In : Clinical infectious diseases : an official publication of the Infectious Diseases Society of America. 69, 10, p. 1812-1816 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Structure of Pseudomonas aeruginosa ribosomes from an aminoglycoside-resistant clinical isolate

    Halfon, Y., Jimenez-Fernandez, A., La Rosa, R., Espinosa Portero, R., Krogh Johansen, H., Matzov, D., Eyal, Z., Bashan, A., Zimmerman, E., Belousoff, M., Molin, S. & Yonath, A., 29 Oct 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 44, p. 22275-22281 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Adapting to the Airways: Metabolic Requirements of Pseudomonas aeruginosa during the Infection of Cystic Fibrosis Patients

    La Rosa, R., Johansen, H. K. & Molin, S., 16 Oct 2019, In : Metabolites. 9, 10, p. 9(10), 234

    Research output: Contribution to journalReviewResearchpeer-review

  22. Published

    Prevalence of infective endocarditis in patients with positive blood cultures: a Danish nationwide study

    Østergaard, L., Bruun, N. E., Voldstedlund, M., Arpi, M., Andersen, C. Ø., Schønheyder, H. C., Lemming, L., Rosenvinge, F., Valeur, N., Søgaard, P., Andersen, P. S., Skov, R., Chen, M., Iversen, K., Gill, S., Lauridsen, T. K., Dahl, A., Oestergaard, L. B., Povlsen, J. A., Moser, C., Bundgaard, H., Køber, L. & Fosbøl, E. L., 14 Oct 2019, In : European Heart Journal. 40, 39, p. 3237-3244 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. E-pub ahead of print

    Risk of neurological disorders in patients with European Lyme neuroborreliosis. A nationwide population-based cohort study

    Haahr, R., Tetens, M. M., Dessau, R. B., Krogfelt, K. A., Bodilsen, J., Andersen, N. S., Møller, J. K., Roed, C., Christiansen, C. B., Ellermann-Eriksen, S., Bangsborg, J. M., Hansen, K., Benfield, T. L., Østergaard Andersen, C., Obel, N., Lebech, A-M. & Omland, L. H., 9 Oct 2019, In : Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    An Equine Wound Model to Study Effects of Bacterial Aggregates on Wound Healing

    Jørgensen, E., Bay, L., Skovgaard, L. T., Bjarnsholt, T. & Jacobsen, S., 1 Oct 2019, In : Advances in Wound Care. 8, 10, p. 487-498 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    Analysis of proximal bone margins in diabetic foot osteomyelitis by conventional culture, DNA sequencing and microscopy

    Malone, M., Fritz, B. G., Vickery, K., Schwarzer, S., Sharma, V., Biggs, N., Radzieta, M., Jeffries, T. T., Dickson, H. G., Jensen, S. O. & Bjarnsholt, T., Oct 2019, In : APMIS - Journal of Pathology, Microbiology and Immunology. 127, 10, p. 660-670 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published

    Antimicrobial Tolerance and Metabolic Adaptations in Microbial Biofilms

    Crabbé, A., Jensen, P. Ø., Bjarnsholt, T. & Coenye, T., Oct 2019, In : Trends in Microbiology. 27, 10, p. 850-863 14 p.

    Research output: Contribution to journalReviewResearchpeer-review

  27. Published

    Emerging Terbinafine Resistance in Trichophyton: Clinical Characteristics, Squalene Epoxidase Gene Mutations, and a Reliable EUCAST Method for Detection

    Saunte, D. M. L., Hare, R. K., Jørgensen, K. M., Jørgensen, R., Deleuran, M., Zachariae, C. O., Thomsen, S. F., Bjørnskov-Halkier, L., Kofoed, K. & Arendrup, M. C., Oct 2019, In : Antimicrobial Agents and Chemotherapy. 63, 10

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. E-pub ahead of print

    Primary ciliary dyskinesia patients have the same P. aeruginosa clone in sinuses and lungs

    Arndal, E., Johansen, H. K., Haagensen, J. A. J., Bartell, J. A., Marvig, R. L., Alanin, M., Aanæs, K., Høiby, N., Nielsen, K. G., Backer, V. & von Buchwald, C., 26 Sep 2019, In : European Respiratory Journal. Supplement.

    Research output: Contribution to journalJournal articleResearchpeer-review

  29. E-pub ahead of print

    Detection of meticillin-resistant Staphylococcus aureus and carbapenemase-producing Enterobacteriaceae in Danish emergency departments - evaluation of national screening guidelines

    Skjøt-Arkil, H., Mogensen, C. B., Lassen, A. T., Johansen, I. S., Chen, M., Petersen, P., Andersen, K. V., Ellermann-Eriksen, S., Møller, J. M., Ludwig, M., Fuglsang-Damgaard, D., Nielsen, F. E., Petersen, D. B., Jensen, U. S. & Rosenvinge, F. S., 5 Sep 2019, In : The Journal of hospital infection.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. Published
  31. Published

    Prolonged and persistent diarrhoea is not restricted to children with acute malnutrition: an observational study in Ethiopia

    Zangenberg, M., Johansen, Ø. H., Abdissa, A., Eshetu, B., Kurtzhals, J. A. L., Friis, H., Sommerfelt, H., Langeland, N. & Hanevik, K., Sep 2019, In : Tropical medicine & international health : TM & IH. 24, 9, p. 1088-1097 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published
  33. Published

    Diagnostic accuracy of the 1,3-β-D-glucan test for pneumocystis pneumonia in a tertiary university hospital in Denmark: A retrospective study

    Engsbro, A. L., Najat, S., Jørgensen, K. M., Kurtzhals, J. A. L. & Arendrup, M. C., Aug 2019, In : Medical Mycology. 57, 6, p. 710-717 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published
  35. Published

    Surveillance of vancomycin-resistant enterococci reveals shift in dominating clones and national spread of a vancomycin-variable vanA Enterococcus faecium ST1421-CT1134 clone, Denmark, 2015 to March 2019

    Hammerum, A. M., Justesen, U. S., Pinholt, M., Roer, L., Kaya, H., Worning, P., Nygaard, S., Kemp, M., Clausen, M. E., Nielsen, K. L., Samulioniené, J., Kjærsgaard, M., Østergaard, C., Coia, J., Søndergaard, T. S., Gaini, S., Schønning, K., Westh, H., Hasman, H. & Holzknecht, B. J., Aug 2019, In : Eurosurveillance. 24, 34

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published
  37. Published

    Growth Rate of Escherichia coli During Human Urinary Tract Infection: Implications for Antibiotic Effect

    Haugan, M. S., Hertz, F. B., Charbon, G., Sahin, B., Løbner-Olesen, A. & Frimodt-Møller, N., 12 Jul 2019, In : Antibiotics. 8, 3, p. E92

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published
  39. Published
  40. Published
  41. Published

    Would you like to purchase a rodent with dermatophytes?

    Tekin, H. G., Sigsgaard, V., Zachariae, C., Hare, R. K., Arendrup, M. C. & Saunte, D. M. L., Jul 2019, In : Mycoses. 62, 7, p. 584-587 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  42. Published

    Astaxanthin from Shrimp Cephalothorax Stimulates the Immune Response by Enhancing IFN-γ, IL-10, and IL-2 Secretion in Splenocytes of Helicobacter Pylori-Infected Mice

    Davinelli, S., Melvang, H. M., Andersen, L. P., Scapagnini, G. & Nielsen, M. E., 26 Jun 2019, In : CNS Drugs. 17, 7

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Antibiotic use in surgical units of selected hospitals in Ghana: a multi-centre point prevalence survey

    Bediako-Bowan, A. A. A., Owusu, E., Labi, A-K., Obeng-Nkrumah, N., Sunkwa-Mills, G., Bjerrum, S., Opintan, J. A., Bannerman, C., Mølbak, K., Kurtzhals, J. A. L. & Newman, M. J., 21 Jun 2019, In : BMC Public Health. 19, 1, p. 797

    Research output: Contribution to journalJournal articleResearchpeer-review

  44. E-pub ahead of print
  45. Published

    LRE-Finder, a Web tool for detection of the 23S rRNA mutations and the optrA, cfr, cfr(B) and poxtA genes encoding linezolid resistance in enterococci from whole-genome sequences

    Hasman, H., Clausen, P. T. L. C., Kaya, H., Hansen, F., Knudsen, J. D., Wang, M., Holzknecht, B. J., Samulioniené, J., Røder, B. L., Frimodt-Møller, N., Lund, O. & Hammerum, A. M., Jun 2019, In : The Journal of antimicrobial chemotherapy. 74, 6, p. 1473-1476 4 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    The urine microbiome - Contamination or a novel paradigm?

    Frimodt-Møller, N., Jun 2019, In : EBioMedicine. 44, p. 20-21 2 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. E-pub ahead of print
  48. Published

    Pivmecillinam for Uncomplicated Lower Urinary Tract Infections Caused by Staphylococcus saprophyticus-Cumulative Observational Data from Four Recent Clinical Studies

    Jansåker, F., Bollestad, M., Vik, I., Lindbæk, M., Bjerrum, L., Frimodt-Møller, N. & Knudsen, J. D., 7 May 2019, In : Antibiotics. 8, 2, 6 p., 57.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published
  50. Published

    Editorial comment

    Moser, C., Song, Z. & Høiby, N., May 2019, In : APMIS - Journal of Pathology, Microbiology and Immunology. 127, 5, p. 385

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    Formation of Pseudomonas aeruginosa inhibition zone during tobramycin disk diffusion is due to transition from planktonic to biofilm mode of growth

    Høiby, N., Henneberg, K-Å., Wang, H., Stavnsbjerg, C., Bjarnsholt, T., Ciofu, O., Johansen, U. R. & Sams, T., May 2019, In : International Journal of Antimicrobial Agents. 53, 5, p. 564-573 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published

    Hydrochloric acid prolongs the lifetime of central venous catheters in haematologic patients with bacteraemia

    Ahmad, A., Moser, C., Classen, V., Hjerming, M., Dahl, A., Kjeldsen, L. & Bjerrum, O. W., May 2019, In : Danish Medical Journal. 66, 5

    Research output: Contribution to journalJournal articleResearchpeer-review

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