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Clinical Microbiology, Department of - a part of Copenhagen University Hospital
  1. 2020
  2. Published

    A case of false-positive pneumococcal urinary antigen test in a bacteremic Streptococcus agalactiae infection

    Slotved, H-C., Svaerke Jørgensen, C., Melbardis Jørgensen, K. & Fuursted, K., Aug 2020, In : APMIS - Journal of Pathology, Microbiology and Immunology. 128, 8, p. 511-512 2 p.

    Research output: Contribution to journalLetterResearchpeer-review

  3. E-pub ahead of print

    Normocellular Community-Acquired Bacterial Meningitis in Adults: A Nationwide Population-Based Case Series

    Vestergaard, H. H., Larsen, L., Brandt, C., Hansen, B. R., Andersen, C. Ø., Lüttichau, H. R., Helweg-Larsen, J., Wiese, L., Storgaard, M., Nielsen, H. & Bodilsen, J., 31 Jul 2020, In : Annals of Emergency Medicine.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. E-pub ahead of print
  5. Published
  6. Published
  7. Published
  8. E-pub ahead of print
  9. E-pub ahead of print
  10. Published

    Sensitivity, specificity, inclusivity and exclusivity of the updated Aptima Combo 2 assay, which provides detection coverage of the new diagnostic-escape Chlamydia trachomatis variants

    Unemo, M., Hansen, M., Hadad, R., Puolakkainen, M., Westh, H., Rantakokko-Jalava, K., Thilesen, C., Cole, M. J., Boiko, I., Lan, P. T., Golparian, D., Ito, S. & Sundqvist, M., 16 Jun 2020, In : BMC Infectious Diseases. 20, 1, 419.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. E-pub ahead of print
  12. Published

    A Chlamydia trachomatis 23S rRNA G1523A variant escaping detection in the Aptima Combo 2 assay (Hologic) was widespread across Denmark in July-September 2019

    Hadad, R., Skov Jensen, J., Westh, H., Grønbaek, I., Jessen Schwartz, L., Nielsen, L., Müller Vang, T., Nielsen, R., Sandborg Weinreich, L., Skov, M. N., Olsen, M., Kjølseth Møller, J., Kolmos, B., Unemo, M. & Hoffmann, S., Jun 2020, In : APMIS - Journal of Pathology, Microbiology and Immunology. 128, 6, p. 440-444 5 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. E-pub ahead of print

    Repeated introduction and spread of the MRSA clone t304/ST6 in Northern Europe

    Bartels, M. D., Worning, P., Andersen, L. P., Bès, M., Enger, H., Ås, C. G., Hansen, T. A., Holzknecht, B. J., Larssen, K. W., Laurent, F., Mäkitalo, B., Pichon, B., Svartström, O. & Westh, H., 18 May 2020, In : Clinical Microbiology and Infection.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. E-pub ahead of print

    Exposure of consumers to substandard antibiotics from selected authorised and unauthorised medicine sales outlets in Ghana

    Bekoe, S. O., Ahiabu, M-A., Orman, E., Tersbøl, B. P., Adosraku, R. K., Hansen, M., Frimodt-Moller, N. & Styrishave, B., 17 May 2020, In : Tropical medicine & international health : TM & IH.

    Research output: Contribution to journalJournal articleResearchpeer-review

  15. Published

    Characteristics of patients with COVID-19 pneumonia at Hvidovre Hospital, March-April 2020

    Israelsen, S. B., Kristiansen, K. T., Hindsberger, B., Ulrik, C. S., Andersen, O., Jensen, M., Andersen, S., Rasmussen, C., Jørgensen, H. L., Østergaard, C., Lindhardt, B. Ø., Kronborg, G. & Benfield, T., 15 May 2020, In : Danish Medical Journal. 67, 6

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published

    High Abundance of Proteobacteria in Ileo-Anal Pouch Anastomosis and Increased Abundance of Fusobacteria Associated with Increased Pouch Inflammation

    Petersen, A. M., Mirsepasi-Lauridsen, H. C., Vester-Andersen, M. K., Sørensen, N., Krogfelt, K. A. & Bendtsen, F., 8 May 2020, In : Antibiotics. 9, 5, 237.

    Research output: Contribution to journalJournal articleResearchpeer-review

  17. E-pub ahead of print

    Strengthening screening for infectious diseases and vaccination among migrants in Europe: What is needed to close the implementation gaps?

    ECDC ad hoc scientific panel, 7 May 2020, In : Travel Medicine and Infectious Disease. p. 101715

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Clinical experiences with a new system for automated hand hygiene monitoring: A prospective observational study

    Iversen, A-M., Kavalaris, C. P., Hansen, R., Hansen, M. B., Alexander, R., Kostadinov, K., Holt, J., Kristensen, B., Knudsen, J. D., Møller, J. K. & Ellermann-Eriksen, S., May 2020, In : American Journal Of Infection Control. 48, 5, p. 527-533 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Investigation of possible clonal transmission of carbapenemase-producing Klebsiella pneumoniae complex member isolates in Denmark using core genome MLST and National Patient Registry Data

    Hammerum, A. M., Lauridsen, C. A. S., Blem, S. L., Roer, L., Hansen, F., Henius, A. E., Holzknecht, B. J., Søes, L., Andersen, L. P., Røder, B. L., Justesen, U. S., Østergaard, C., Søndergaard, T., Dzajic, E., Wang, M., Fulgsang-Damgaard, D., Møller, K. L., Porsbo, L. J. & Hasman, H., May 2020, In : International Journal of Antimicrobial Agents. 55, 5, p. 105931 105931.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. Published

    Surveillance of OXA-244-producing Escherichia coli and epidemiologic investigation of cases, Denmark, January 2016 to August 2019

    Hammerum, A. M., Porsbo, L. J., Hansen, F., Roer, L., Kaya, H., Henius, A., Møller, K. L., Justesen, U. S., Søes, L., Røder, B. L., Thomsen, P. K., Wang, M., Søndergaard, T. S., Holzknecht, B. J., Østergaard, C., Kjerulf, A., Kristensen, B. & Hasman, H., May 2020, In : Eurosurveillance. 25, 18, p. 1-9 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Multicenter evaluation of the QIAstat-Dx respiratory panel for detection of viruses and bacteria in nasopharyngeal swab specimens

    Leber, A. L., Lisby, J. G., Hansen, G., Relich, R. F., Schneider, U. V., Granato, P., Young, S., Pareja, J. & Hannet, I., 23 Apr 2020, In : Journal of Clinical Microbiology. 58, 5, e00155-20.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Effects of Antibiotics on the Intestinal Microbiota of Mice

    Hertz, F. B., Budding, A. E., van der Lugt-Degen, M., Savelkoul, P. H., Løbner-Olesen, A. & Frimodt-Møller, N., 17 Apr 2020, In : Antibiotics. 9, 4, 191.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. Published

    Core genome multi-locus sequence typing as an essential tool in a high-cost livestock-associated meticillin-resistant Staphylococcus aureus CC398 hospital outbreak

    Slott Jensen, M. L., Skov, M. N., Kristiansen, H. P., Toft, A., Lundgaard, H., Gumpert, H., Westh, H., Holm, A., Kolmos, H. J. & Kemp, M., Apr 2020, In : The Journal of hospital infection. 104, 4, p. 574-581 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  24. Published

    Multicenter evaluation of the QIAstat Respiratory Panel-A new rapid highly multiplexed PCR based assay for diagnosis of acute respiratory tract infections

    Parčina, M., Schneider, U. V., Visseaux, B., Jozić, R., Hannet, I. & Lisby, J. G., 12 Mar 2020, In : PLoS One. 15, 3, e0230183.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Published

    First reported human bloodstream infection with Vagococcus lutrae

    Altintas, I., Andrews, V. & Larsen, M. V., Mar 2020, In : New Microbes and New Infections. 34, 100649.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. Published
  27. Published

    The environmental occurrence of Pseudomonas aeruginosa

    Crone, S., Vives-Flórez, M., Saunders, A. M., Kvich, L., Malone, M., Nicolaisen, M. H., Martínez-García, E., Rojas-Acosta, C., Catalina Gomez-Puerto, M., Calum, H., Whiteley, M., Kolter, R. & Bjarnsholt, T., Mar 2020, In : APMIS - Journal of Pathology, Microbiology and Immunology. 128, 3, p. 220-231 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. E-pub ahead of print
  29. Published
  30. Published

    Associations between blood cultures after surgery for colorectal cancer and long-term oncological outcomes

    Watt, S. K., Fransgaard, T., Degett, T. H., Thygesen, L. C., Benfield, T., Knudsen, J. D., Fuursted, K., Jensen, T. G., Dessau, R. B., Schønheyder, H. C., Møller, J. K. & Gögenur, I., Feb 2020, In : The British journal of surgery. 107, 3, p. 310-315 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  31. Published

    Detection of meticillin-resistant Staphylococcus aureus and carbapenemase-producing Enterobacteriaceae in Danish emergency departments - evaluation of national screening guidelines

    Skjøt-Arkil, H., Mogensen, C. B., Lassen, A. T., Johansen, I. S., Chen, M., Petersen, P., Andersen, K. V., Ellermann-Eriksen, S., Møller, J. M., Ludwig, M., Fuglsang-Damgaard, D., Nielsen, F. E., Petersen, D. B., Jensen, U. S. & Rosenvinge, F. S., Jan 2020, In : The Journal of hospital infection. 104, 1, p. 27-32 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Published
  33. Published

    Long-term survival, health, social functioning, and education in patients with an enterovirus central nervous system infection, Denmark, 1997-2016

    Omland, L. H., Holm-Hansen, C., Lebech, A-M., Dessau, R. B., Bodilsen, J., Andersen, N. S., Roed, C., Christiansen, C. B., Ellermann-Eriksen, S., Midgley, S., Nielsen, L., Benfield, T., Hansen, A-B. E., Andersen, C. Ø., Rothman, K. J., Sørensen, H. T., Fischer, T. K. & Obel, N., 2020, In : The Journal of infectious diseases. 222, 4, p. 619-627 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. Published

    Molecular characterization of Danish ESBL/AmpC-producing Klebsiella pneumoniae from bloodstream infections, 2018

    Hansen, S. K., Kaya, H., Roer, L., Hansen, F., Skovgaard, S., Justesen, U. S., Hansen, D. S., Andersen, L. P., Knudsen, J. D., Røder, B. L., Østergaard, C., Søndergaard, T., Dzajic, E., Wang, M., Samulioniené, J., Hasman, H. & Hammerum, A. M., 2020, In : Journal of Global Antimicrobial Resistance. 22, p. 562-567 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  35. Published
  36. E-pub ahead of print

    Risk of neurological disorders in patients with European Lyme neuroborreliosis. A nationwide population-based cohort study

    Haahr, R., Tetens, M. M., Dessau, R. B., Krogfelt, K. A., Bodilsen, J., Andersen, N. S., Møller, J. K., Roed, C., Christiansen, C. B., Ellermann-Eriksen, S., Bangsborg, J. M., Hansen, K., Benfield, T. L., Østergaard Andersen, C., Obel, N., Lebech, A-M. & Omland, L. H., 2020, In : Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

    Research output: Contribution to journalJournal articleResearchpeer-review

  37. Published
  38. 2019
  39. Published

    Antibiotic resistance patterns of Escherichia coli in migrants vs non-migrants: a study of 14,561 urine samples

    Sloth, L. B., Nielsen, R. T., Østergaard, C., Nellums, L. B., Hargreaves, S., Friedland, J. S. & Norredam, M., 23 Dec 2019, In : Journal of Travel Medicine. 26, 8

    Research output: Contribution to journalJournal articleResearchpeer-review

  40. Published
  41. Published
  42. Published

    Evolution and Global Transmission of a Multidrug-Resistant, Community-Associated Methicillin-Resistant Staphylococcus aureus Lineage from the Indian Subcontinent

    Steinig, E. J., Duchene, S., Robinson, D. A., Monecke, S., Yokoyama, M., Laabei, M., Slickers, P., Andersson, P., Williamson, D., Kearns, A., Goering, R. V., Dickson, E., Ehricht, R., Ip, M., O'Sullivan, M. V. N., Coombs, G. W., Petersen, A., Brennan, G., Shore, A. C., Coleman, D. C., Pantosti, A., de Lencastre, H., Westh, H., Kobayashi, N., Heffernan, H., Strommenger, B., Layer, F., Weber, S., Aamot, H. V., Skakni, L., Peacock, S. J., Sarovich, D., Harris, S., Parkhill, J., Massey, R. C., Holden, M. T. G., Bentley, S. D. & Tong, S. Y. C., 26 Nov 2019, In : mBio. 10, 6, p. 1-20 20 p., e01105-19.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published
  44. Published

    Multicenter evaluation of the new QIAstat Gastrointestinal Panel for the rapid syndromic testing of acute gastroenteritis

    Hannet, I., Engsbro, A. L., Pareja, J., Schneider, U. V., Lisby, J. G., Pružinec-Popović, B., Hoerauf, A. & Parčina, M., Nov 2019, In : European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology. 38, 11, p. 2103-2112 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published

    Genome Sequence of an Unknown Subtype of Hepatitis C Virus Genotype 6: Another Piece for the Taxonomic Puzzle

    Pedersen, M. S., Mollerup, S., Nielsen, L. G., Jenssen, H., Bukh, J. & Schønning, K., 17 Oct 2019, In : Microbiology Resource Announcements. 8, 42, e01030-19.

    Research output: Contribution to journalJournal articleResearchpeer-review

  46. Published

    Prevalence of infective endocarditis in patients with positive blood cultures: a Danish nationwide study

    Østergaard, L., Bruun, N. E., Voldstedlund, M., Arpi, M., Andersen, C. Ø., Schønheyder, H. C., Lemming, L., Rosenvinge, F., Valeur, N., Søgaard, P., Andersen, P. S., Skov, R., Chen, M., Iversen, K., Gill, S., Lauridsen, T. K., Dahl, A., Oestergaard, L. B., Povlsen, J. A., Moser, C., Bundgaard, H., Køber, L. & Fosbøl, E. L., 14 Oct 2019, In : European Heart Journal. 40, 39, p. 3237-3244 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  47. Published

    LISTERIA MENINGITIS IN DANISH CHILDREN 2000-2017: A Rare Event Even in a Country With High Rates of Invasive Listeriosis

    Vissing, N. H., Kristensen, K., Mønster, M. B., Møller, F. T., Knudsen, J. D., Poulsen, A., Ethelberg, S. & Nygaard, U., 1 Oct 2019, In : The Pediatric infectious disease journal. 38, 10, p. e274-e276 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Trends and prediction of antimicrobial susceptibility in urinary bacteria isolated in European emergency departments: the EuroUTI 2010-2016 Study

    Westh, H., Pedersen, M. & EuroUTI 2010-2016 Study Group , 1 Oct 2019, In : The Journal of antimicrobial chemotherapy. 74, 10, p. 3069-3076 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Increased abundance of proteobacteria in aggressive Crohn's disease seven years after diagnosis

    Vester-Andersen, M. K., Mirsepasi-Lauridsen, H. C., Prosberg, M. V., Mortensen, C. O., Träger, C., Skovsen, K., Thorkilgaard, T., Nøjgaard, C., Vind, I., Krogfelt, K. A., Sørensen, N., Bendtsen, F. & Petersen, A. M., 17 Sep 2019, In : Scientific Reports. 9, 13473.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published

    ESBL-production in Escherichia coli and Klebsiella pneumoniae isolates from Nigeria

    Hertz, F. B., Jansåker, F., Okon, K. O., Abdulmumin, I. S., Onah, J. O., Ladan, J. & Knudsen, J. D., Sep 2019, In : MicrobiologyOpen. 8, 9, e00816.

    Research output: Contribution to journalJournal articleResearchpeer-review

  51. Published

    Evolutionary Pathways to Persistence of Highly Fit and Resistant Hepatitis C Virus Protease Inhibitor Escape Variants

    Jensen, S. B., Fahnøe, U., Pham, L. V., Serre, S., Tang, Q., Ghanem, L., Pedersen, M. S., Ramirez, S., Humes, D., Pihl, A. F., Filskov, J., Sølund, C. S., Dietz, J., Fourati, S., Pawlotsky, J-M., Sarrazin, C., Weis, N., Schønning, K., Krarup, H., Bukh, J. & Gottwein, J. M., Sep 2019, In : Hepatology (Baltimore, Md.). 70, 3, p. 771-787 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  52. Published
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