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Clinical Microbiology, Department of - a part of Copenhagen University Hospital
  1. 2019
  2. E-pub ahead of print

    Antibiotic resistance patterns of Escherichia coli in migrants versus non-migrants: a study of 14,561 urine samples

    Sloth, L. B., Nielsen, R. T., Østergaard, C., Nellums, L. B., Hargreaves, S., Friedland, J. S. & Norredam, M., 24 Oct 2019, In : Journal of Travel Medicine.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. E-pub ahead of print

    Clinical experiences with a new system for automated hand hygiene monitoring: A prospective observational study

    Iversen, A-M., Kavalaris, C. P., Hansen, R., Hansen, M. B., Alexander, R., Kostadinov, K., Holt, J., Kristensen, B., Knudsen, J. D., Møller, J. K. & Ellermann-Eriksen, S., 18 Oct 2019, In : American Journal Of Infection Control.

    Research output: Contribution to journalJournal articleResearchpeer-review

  4. Published
  5. E-pub ahead of print

    Risk of neurological disorders in patients with European Lyme neuroborreliosis. A nationwide population-based cohort study

    Haahr, R., Tetens, M. M., Dessau, R. B., Krogfelt, K. A., Bodilsen, J., Andersen, N. S., Møller, J. K., Roed, C., Christiansen, C. B., Ellermann-Eriksen, S., Bangsborg, J. M., Hansen, K., Benfield, T. L., Østergaard Andersen, C., Obel, N., Lebech, A-M. & Omland, L. H., 9 Oct 2019, In : Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

    Research output: Contribution to journalJournal articleResearchpeer-review

  6. Published

    LISTERIA MENINGITIS IN DANISH CHILDREN 2000-2017: A Rare Event Even in a Country With High Rates of Invasive Listeriosis

    Vissing, N. H., Kristensen, K., Mønster, M. B., Møller, F. T., Knudsen, J. D., Poulsen, A., Ethelberg, S. & Nygaard, U., 1 Oct 2019, In : The Pediatric infectious disease journal. 38, 10, p. 274-276 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. E-pub ahead of print
  8. Published

    Trends and prediction of antimicrobial susceptibility in urinary bacteria isolated in European emergency departments: the EuroUTI 2010-2016 Study

    EuroUTI 2010-2016 Study Group , Westh, H. & Pedersen, M., 1 Oct 2019, In : The Journal of antimicrobial chemotherapy. 74, 10, p. 3069-3076 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Published

    Increased abundance of proteobacteria in aggressive Crohn's disease seven years after diagnosis

    Vester-Andersen, M. K., Mirsepasi-Lauridsen, H. C., Prosberg, M. V., Mortensen, C. O., Träger, C., Skovsen, K., Thorkilgaard, T., Nøjgaard, C., Vind, I., Krogfelt, K. A., Sørensen, N., Bendtsen, F. & Petersen, A. M., 17 Sep 2019, In : Scientific Reports. 9, 1, p. 13473

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Published

    High-Throughput Sequencing-Based Investigation of Viruses in Human Cancers by Multienrichment Approach

    Mollerup, S., Asplund, M., Friis-Nielsen, J., Kjartansdóttir, K. R., Fridholm, H., Hansen, T. A., Herrera, J. A. R., Barnes, C. J., Jensen, R. H., Richter, S. R., Nielsen, I. B., Pietroni, C., Alquezar-Planas, D. E., Rey-Iglesia, A., Olsen, P. V. S., Rajpert-De Meyts, E., Groth-Pedersen, L., von Buchwald, C., Jensen, D. H., Gniadecki, R., Høgdall, E., Langhoff, J. L., Pete, I., Vereczkey, I., Baranyai, Z., Dybkaer, K., Johnsen, H. E., Steiniche, T., Hokland, P., Rosenberg, J., Baandrup, U., Sicheritz-Pontén, T., Willerslev, E., Brunak, S., Lund, O., Mourier, T., Vinner, L., Izarzugaza, J. M. G., Nielsen, L. P. & Hansen, A. J., 13 Sep 2019, In : The Journal of infectious diseases. 220, 8, p. 1312-1324 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. E-pub ahead of print

    Detection of meticillin-resistant Staphylococcus aureus and carbapenemase-producing Enterobacteriaceae in Danish emergency departments - evaluation of national screening guidelines

    Skjøt-Arkil, H., Mogensen, C. B., Lassen, A. T., Johansen, I. S., Chen, M., Petersen, P., Andersen, K. V., Ellermann-Eriksen, S., Møller, J. M., Ludwig, M., Fuglsang-Damgaard, D., Nielsen, F. E., Petersen, D. B., Jensen, U. S. & Rosenvinge, F. S., 5 Sep 2019, In : The Journal of hospital infection.

    Research output: Contribution to journalJournal articleResearchpeer-review

  12. Published

    ESBL-production in Escherichia coli and Klebsiella pneumoniae isolates from Nigeria

    Hertz, F. B., Jansåker, F., Okon, K. O., Abdulmumin, I. S., Onah, J. O., Ladan, J. & Knudsen, J. D., Sep 2019, In : MicrobiologyOpen. 8, 9, p. e816 e816.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Evolutionary Pathways to Persistence of Highly Fit and Resistant Hepatitis C Virus Protease Inhibitor Escape Variants

    Jensen, S. B., Fahnøe, U., Pham, L. V., Serre, S., Tang, Q., Ghanem, L., Pedersen, M. S., Ramirez, S., Humes, D., Pihl, A. F., Filskov, J., Sølund, C. S., Dietz, J., Fourati, S., Pawlotsky, J-M., Sarrazin, C., Weis, N., Schønning, K., Krarup, H., Bukh, J. & Gottwein, J. M., Sep 2019, In : Hepatology (Baltimore, Md.). 70, 3, p. 771-787 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. Published
  15. Published

    Persistence of antibodies to pneumococcal conjugate vaccine compared to polysaccharide vaccine in patients with Crohn's disease - one year follow up

    Kantsø, B., Halkjær, S. I., Østergaard Thomsen, O., Belard, E., Gottschalck, I. B., Jørgensen, C. S., Krogfelt, K. A., Slotved, H-C., Ingels, H. & Petersen, A. M., Sep 2019, In : Infectious diseases (London, England). 51, 9, p. 651-658 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. Published
  17. Published
  18. E-pub ahead of print
  19. E-pub ahead of print
  20. Published

    Antibiotic use during pregnancy and childhood overweight: A population-based nationwide cohort study

    Jess, T., Morgen, C. S., Harpsøe, M. C., Sørensen, T. I. A., Ajslev, T. A., Antvorskov, J. C. & Allin, K. H., 8 Aug 2019, In : Scientific Reports. 9, 1, p. 11528 11528.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. Published

    Diagnostic accuracy of the 1,3-β-D-glucan test for pneumocystis pneumonia in a tertiary university hospital in Denmark: A retrospective study

    Engsbro, A. L., Najat, S., Jørgensen, K. M., Kurtzhals, J. A. L. & Arendrup, M. C., Aug 2019, In : Medical Mycology. 57, 6, p. 710-717 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  22. Published

    Surveillance of vancomycin-resistant enterococci reveals shift in dominating clones and national spread of a vancomycin-variable vanA Enterococcus faecium ST1421-CT1134 clone, Denmark, 2015 to March 2019

    Hammerum, A. M., Justesen, U. S., Pinholt, M., Roer, L., Kaya, H., Worning, P., Nygaard, S., Kemp, M., Clausen, M. E., Nielsen, K. L., Samulioniené, J., Kjærsgaard, M., Østergaard, C., Coia, J., Søndergaard, T. S., Gaini, S., Schønning, K., Westh, H., Hasman, H. & Holzknecht, B. J., Aug 2019, In : Eurosurveillance. 24, 34

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. E-pub ahead of print
  24. Published
  25. Published
  26. Published

    Concerns regarding the validity of the conclusion in a recently published paper on Roche Liat implementation

    Lisby, J. G. & Schneider, U. V., 1 Jul 2019, In : The Journal of hospital infection. 102, 3, p. 355-356 2 p.

    Research output: Contribution to journalLetterResearchpeer-review

  27. Published

    Risk factors and prognosis of seizures in adults with community-acquired bacterial meningitis in Denmark: observational cohort studies

    DASGIB study group, 1 Jul 2019, In : BMJ Open. 9, 7, e030263.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. Published
  29. Published
  30. Published
  31. Published

    Carrier prevalence and risk factors for colonisation of multiresistant bacteria in Danish emergency departments: a cross-sectional survey

    Skjøt-Arkil, H., Mogensen, C. B., Lassen, A. T., Johansen, I. S., Chen, M., Petersen, P., Andersen, K. V., Ellermann-Eriksen, S., Møller, J. M., Ludwig, M., Fuglsang-Damgaard, D., Nielsen, F. E., Petersen, D. B., Jensen, U. S. & Rosenvinge, F. S., 27 Jun 2019, In : BMJ Open. 9, 6, p. e029000

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. E-pub ahead of print
  33. E-pub ahead of print

    Prevalence of infective endocarditis in patients with positive blood cultures: a Danish nationwide study

    Østergaard, L., Bruun, N. E., Voldstedlund, M., Arpi, M., Andersen, C. Ø., Schønheyder, H. C., Lemming, L., Rosenvinge, F., Valeur, N., Søgaard, P., Andersen, P. S., Skov, R., Chen, M., Iversen, K., Gill, S., Lauridsen, T. K., Dahl, A., Oestergaard, L. B., Povlsen, J. A., Moser, C., Bundgaard, H., Køber, L. & Fosbøl, E. L., 30 May 2019, In : European Heart Journal.

    Research output: Contribution to journalJournal articleResearchpeer-review

  34. E-pub ahead of print
  35. Published

    Pivmecillinam for Uncomplicated Lower Urinary Tract Infections Caused by Staphylococcus saprophyticus-Cumulative Observational Data from Four Recent Clinical Studies

    Jansåker, F., Bollestad, M., Vik, I., Lindbæk, M., Bjerrum, L., Frimodt-Møller, N. & Knudsen, J. D., 7 May 2019, In : Antibiotics. 8, 2, p. 1-6 6 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  36. Published
  37. Published

    Ceftriaxone-resistant Salmonella enterica serotype Typhi in a pregnant traveller returning from Karachi, Pakistan to Denmark, 2019

    Engsbro, A. L., Riis Jespersen, H. S., Goldschmidt, M. I., Mollerup, S., Worning, P., Pedersen, M. S., Westh, H. & Schneider, U. V., May 2019, In : Eurosurveillance. 24, 21

    Research output: Contribution to journalJournal articleResearchpeer-review

  38. Published

    Systematic review with meta-analyses: does the pathogen matter in post-infectious irritable bowel syndrome?

    Svendsen, A. T., Bytzer, P. & Engsbro, A. L., May 2019, In : Scandinavian Journal of Gastroenterology. 54, 5, p. 546-562 17 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  39. Published
  40. E-pub ahead of print
  41. Published
  42. Published

    Increased risk of Staphylococcus aureus bacteremia in hemodialysis-A nationwide study

    Chaudry, M. S., Gislason, G. H., Kamper, A-L., Rix, M., Larsen, A. R., Petersen, A., Andersen, P. S., Skov, R. L., Fosbøl, E. L., Westh, H., Schønheyder, H. C., Benfield, T. L., Fowler, V. G., Torp-Pedersen, C. & Bruun, N. E., Apr 2019, In : Hemodialysis international. International Symposium on Home Hemodialysis. 23, 2, p. 230-238 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  43. Published

    Escherichia coli Pathobionts Associated with Inflammatory Bowel Disease

    Mirsepasi-Lauridsen, H. C., Vallance, B. A., Krogfelt, K. A. & Petersen, A. M., 20 Mar 2019, In : Clinical Microbiology Reviews. 32, 2

    Research output: Contribution to journalReviewResearchpeer-review

  44. Published

    Children Attending Day Care Centers are a Year-round Reservoir of Gastrointestinal Viruses

    Hebbelstrup Jensen, B., Jokelainen, P., Nielsen, A. C. Y., Franck, K. T., Rejkjær Holm, D., Schønning, K., Petersen, A. M. & Krogfelt, K. A., 1 Mar 2019, In : Scientific Reports. 9, 1, p. 3286 3286.

    Research output: Contribution to journalJournal articleResearchpeer-review

  45. Published
  46. Published
  47. Published

    Coronary artery calcium and intima-media thickness are associated with level of cytomegalovirus immunoglobulin G in HIV-infected patients

    Knudsen, A., Kristoffersen, U. S., Panum, I., Hansen, Y. B., Skottrup, P. D., Hasbak, P., Kjaer, A. & Lebech, A-M., Jan 2019, In : HIV Medicine. 20, 1, p. 60-62 3 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  48. Published

    Developmental roadmap for antimicrobial susceptibility testing systems

    JPIAMR AMR-RDT Working Group on Antimicrobial Resistance and Rapid Diagnostic Testing, Jan 2019, In : Nature Reviews. Microbiology. 17, 1, p. 51-62 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  49. Published

    Cefuroxime compared to piperacillin/tazobactam as empirical treatment of Escherichia coli bacteremia in a low Extended-spectrum beta-lactamase (ESBL) prevalence cohort

    Thønnings, S., Jansåker, F., Gradel, K. O., Styrishave, B. & Knudsen, J. D., 2019, In : Infection and Drug Resistance. 12, p. 1257-1264 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  50. Published
  51. 2018
  52. Published

    Comparison of methods for measuring antibiotic consumption in an intensive care unit

    Olsen, M. H., Anhøj, J., Knudsen, J. D., Frimodt-Møller, N. & Møller, K., 14 Dec 2018, In : APMIS - Journal of Pathology, Microbiology and Immunology. 127, 1, p. 33-40 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

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