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The Capital Region of Denmark - a part of Copenhagen University Hospital

Journal of Proteome Research, 1535-3893

Journal

  1. 2020
  2. Published

    Integrated univariate, multivariate and correlation-based network analyses reveal metabolite-specific effects on bacterial growth and biofilm formation in necrotizing soft tissue infections

    Afzal, M., Saccenti, E., Madsen, M., Hansen, M. B., Hyldegaard, O., Skrede, S., Martins Dos Santos, V., Norrby Teglund, A. & Svensson, M., 7 Feb 2020, In : Journal of Proteome Research. 19, 2, p. 688-698 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  3. 2016
  4. New Nordic Diet versus Average Danish Diet: A Randomized Controlled Trial Revealed Healthy Long-Term Effects of the New Nordic Diet by GC-MS Blood Plasma Metabolomics

    Khakimov, B., Poulsen, S. K., Savorani, F., Acar, E., Gürdeniz, G., Larsen, T. M., Astrup, A., Dragsted, L. O. & Engelsen, S. B., 3 Jun 2016, In : Journal of Proteome Research. 15, 6, p. 1939-54 16 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  5. 2015
  6. Published

    Integrative Transcriptomic and Metabonomic Molecular Profiling of Colonic Mucosal Biopsies Indicates a Unique Molecular Phenotype for Ulcerative Colitis

    Rantalainen, M., Bjerrum, J. T., Olsen, J., Nielsen, O. H. & Wang, Y., 2015, In : Journal of Proteome Research. 14, 1, p. 479–490

    Research output: Contribution to journalJournal articleResearchpeer-review

  7. 2014
  8. Glycopeptide enrichment using a combination of ZIC-HILIC and cotton wool for exploring the glycoproteome of wheat flour albumins

    Dedvisitsakul, P., Jacobsen, S., Svensson, B., Bunkenborg, J., Finnie, C. & Hägglund, P., 2 May 2014, In : Journal of Proteome Research. 13, 5, p. 2696-703 8 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  9. Quantitative label-free phosphoproteomics of six different life stages of the late blight pathogen Phytophthora infestans reveals abundant phosphorylation of members of the CRN effector family

    Resjö, S., Ali, A., Meijer, H. J. G., Seidl, M. F., Snel, B., Sandin, M., Levander, F., Govers, F. & Andreasson, E., 4 Apr 2014, In : Journal of Proteome Research. 13, 4, p. 1848-59 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  10. Untargeted metabolomics as a screening tool for estimating compliance to a dietary pattern

    Andersen, M-B. S., Rinnan, Å., Manach, C., Poulsen, S. K., Pujos-Guillot, E., Larsen, T. M., Astrup, A. & Dragsted, L. O., 7 Mar 2014, In : Journal of Proteome Research. 13, 3, p. 1405-18 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  11. 2013
  12. Published

    Cutting edge proteomics: benchmarking of six commercial trypsins

    Bunkenborg, J., Espadas, G. & Molina, H., 2 Aug 2013, In : Journal of Proteome Research. 12, 8, p. 3631-41 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  13. Published

    Trapping and proteomic identification of cellular substrates of the ClpP protease in Staphylococcus aureus

    Feng, J., Michalik, S., Varming, A. N., Andersen, J. H., Albrecht, D., Jelsbak, L., Krieger, S., Ohlsen, K., Hecker, M., Gerth, U., Ingmer, H. & Frees, D., 1 Feb 2013, In : Journal of Proteome Research. 12, 2, p. 547-58 12 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  14. 2012
  15. Published

    Quantitative proteome profiling of normal human circulating microparticles

    Østergaard, O., Nielsen, C. T., Iversen, L. V., Jacobsen, S., Tanassi, J. T. & Heegaard, N. H. H., 2012, In : Journal of Proteome Research. 11, 4, p. 2154-63 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  16. 2010
  17. Published

    1H NMR spectroscopy-based interventional metabolic phenotyping: a cohort study of rheumatoid arthritis patients

    Lauridsen, M. B., Bliddal, H., Christensen, R. D. K., Danneskiold-Samsøe, B., Bennett, R., Keun, H., Lindon, J. C., Nicholson, J. K., Christiansen, M. H. D., Jaroszewski, J. W., Hansen, S. H. & Cornett, C., 3 Sep 2010, In : Journal of Proteome Research. 9, 9, p. 4545-53 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  18. Published

    Proteomic profiling of mammary carcinomas identifies C7orf24, a gamma-glutamyl cyclotransferase, as a potential cancer biomarker

    Gromov, P., Gromova, I., Friis, E., Timmermans-Wielenga, V., Rank, F., Simon, R., Sauter, G. & Moreira, J. M. A., 6 Aug 2010, In : Journal of Proteome Research. 9, 8, p. 3941-53 13 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  19. Published

    Metabonomics in Ulcerative Colitis: Diagnostics, Biomarker Identification, And Insight into the Pathophysiology

    Bjerrum, J. T., Nielsen, O. H., Shen, H., Tang, H. R., Nicholson, J. B., Wang, L. & Olsen, J., 2010, In : Journal of Proteome Research. 9, 2, p. 954-962 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  20. MSQuant, an open source platform for mass spectrometry-based quantitative proteomics

    Mortensen, P., Gouw, J. W., Olsen, J. V., Ong, S-E., Rigbolt, K. T. G., Bunkenborg, J., Cox, J., Foster, L. J., Heck, A. J. R., Blagoev, B., Andersen, J. S. & Mann, M., 2010, In : Journal of Proteome Research. 9, 1, p. 393-403 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  21. 2008
  22. Identification of thioredoxin disulfide targets using a quantitative proteomics approach based on isotope-coded affinity tags

    Hägglund, P., Bunkenborg, J., Maeda, K. & Svensson, B., 2008, In : Journal of Proteome Research. 7, 12, p. 5270-6 7 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  23. 2007
  24. An enzymatic deglycosylation scheme enabling identification of core fucosylated N-glycans and O-glycosylation site mapping of human plasma proteins

    Hägglund, P., Matthiesen, R., Elortza, F., Højrup, P., Roepstorff, P., Jensen, O. N. & Bunkenborg, J., 2007, In : Journal of Proteome Research. 6, 8, p. 3021-31 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  25. Quantitation of multisite EGF receptor phosphorylation using mass spectrometry and a novel normalization approach

    Boeri Erba, E., Matthiesen, R., Bunkenborg, J., Schulze, W. X., Di Stefano, P., Cabodi, S., Tarone, G., Defilippi, P. & Jensen, O. N., 2007, In : Journal of Proteome Research. 6, 7, p. 2768-85 18 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  26. 2006
  27. Modification-specific proteomics of plasma membrane proteins: identification and characterization of glycosylphosphatidylinositol-anchored proteins released upon phospholipase D treatment

    Elortza, F., Mohammed, S., Bunkenborg, J., Foster, L. J., Nühse, T. S., Brodbeck, U., Peck, S. C. & Jensen, O. N., 2006, In : Journal of Proteome Research. 5, 4, p. 935-43 9 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  28. 2005
  29. VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins

    Matthiesen, R., Trelle, M. B., Højrup, P., Bunkenborg, J. & Jensen, O. N., 2005, In : Journal of Proteome Research. 4, 6, p. 2338-47 10 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  30. 2004
  31. A new strategy for identification of N-glycosylated proteins and unambiguous assignment of their glycosylation sites using HILIC enrichment and partial deglycosylation

    Hägglund, P., Bunkenborg, J., Elortza, F., Jensen, O. N. & Roepstorff, P., 2004, In : Journal of Proteome Research. 3, 3, p. 556-66 11 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

  32. Comprehensive proteomic analysis of human pancreatic juice

    Grønborg, M., Bunkenborg, J., Kristiansen, T. Z., Jensen, O. N., Yeo, C. J., Hruban, R. H., Maitra, A., Goggins, M. G. & Pandey, A., 2004, In : Journal of Proteome Research. 3, 5, p. 1042-55 14 p.

    Research output: Contribution to journalJournal articleResearchpeer-review

ID: 112099