Rapid whole-genome sequencing for detection and characterization of microorganisms directly from clinical samples

Keyphrases

• Clinical Samples 100%
• Microorganisms 100%
• Whole Genome Sequencing 100%
• Rapid Genome Sequencing 100%
• Urine Samples 50%
• Bioinformatics Tools 50%
• Sequence Data 33%
• Diagnostic Time 33%
• Clinically Significant 16%
• Direct Sequencing 16%
• Escherichia Coli 16%
• Clinical Microbiology 16%
• Urinary Tract Infection 16%
• Publicly Available 16%
• Random Urine 16%
• Pure Culture 16%
• Species Identification 16%
• Antimicrobial Susceptibility 16%
• Core Genome multilocus Sequence Typing (cgMLST) 16%
• Phylogenetic Relationship 16%
• Pathogenic Strains 16%
• Rapid Methods 16%
• Clinical Implementation 16%
• Enterococcus Faecalis 16%
• Bacterial Identification 16%
• Isolated Bacteria 16%
• Negative Samples 16%
• Polymicrobial Samples 16%
• Conventional Microbiology 16%

Immunology and Microbiology

• Microorganism 100%
• Whole Genome Sequencing 100%
• Urine Sampling 42%
• Clinical Microbiology 14%
• Escherichia coli 14%
• Phylogeny 14%
• Urinary Tract 14%
• Enterococcus faecalis 14%
• Species Identification 14%
• Antibiotic Sensitivity 14%
• Multilocus Sequence Typing 14%
• Microbiology 14%
• Bacterium Identification 14%

Veterinary Science and Veterinary Medicine

• Escherichia coli 100%