PET-BIDS, an extension to the brain imaging data structure for positron emission tomography

Martin Norgaard; Granville J Matheson; Hanne D Hansen; Adam Thomas; Graham Searle; Gaia Rizzo; Mattia Veronese; Alessio Giacomel; Maqsood Yaqub; Matteo Tonietto; Thomas Funck; Ashley Gillman; Hugo Boniface; Alexandre Routier; Jelle R Dalenberg; Tobey Betthauser; Franklin Feingold; Christopher J Markiewicz; Krzysztof J Gorgolewski; Ross W Blair; Stefan Appelhoff; Remi Gau; Taylor Salo; Guiomar Niso; Cyril Pernet; Christophe Phillips; Robert Oostenveld; Jean-Dominique Gallezot; Richard E Carson; Gitte M Knudsen; Robert B Innis; Melanie Ganz

doi:10.1038/s41597-022-01164-1

PET-BIDS, an extension to the brain imaging data structure for positron emission tomography

Martin Norgaard, Granville J Matheson, Hanne D Hansen, Adam Thomas, Graham Searle, Gaia Rizzo, Mattia Veronese, Alessio Giacomel, Maqsood Yaqub, Matteo Tonietto, Thomas Funck, Ashley Gillman, Hugo Boniface, Alexandre Routier, Jelle R Dalenberg, Tobey Betthauser, Franklin Feingold, Christopher J Markiewicz, Krzysztof J Gorgolewski, Ross W BlairStefan Appelhoff, Remi Gau, Taylor Salo, Guiomar Niso, Cyril Pernet, Christophe Phillips, Robert Oostenveld, Jean-Dominique Gallezot, Richard E Carson, Gitte M Knudsen, Robert B Innis, Melanie Ganz^*

^*Corresponding author af dette arbejde

Afdeling for Hjerne- og Nervesygdomme

23 Citationer (Scopus)

Abstract

The Brain Imaging Data Structure (BIDS) is a standard for organizing and describing neuroimaging datasets, serving not only to facilitate the process of data sharing and aggregation, but also to simplify the application and development of new methods and software for working with neuroimaging data. Here, we present an extension of BIDS to include positron emission tomography (PET) data, also known as PET-BIDS, and share several open-access datasets curated following PET-BIDS along with tools for conversion, validation and analysis of PET-BIDS datasets.

Originalsprog	Engelsk
Artikelnummer	65
Tidsskrift	Scientific Data
Vol/bind	9
Udgave nummer	1
Sider (fra-til)	1-7
Antal sider	7
ISSN	2052-4463
DOI	https://doi.org/10.1038/s41597-022-01164-1
Status	Udgivet - 2 mar. 2022

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Norgaard, M., Matheson, G. J., Hansen, H. D., Thomas, A., Searle, G., Rizzo, G., Veronese, M., Giacomel, A., Yaqub, M., Tonietto, M., Funck, T., Gillman, A., Boniface, H., Routier, A., Dalenberg, J. R., Betthauser, T., Feingold, F., Markiewicz, C. J., Gorgolewski, K. J., ... Ganz, M. (2022). PET-BIDS, an extension to the brain imaging data structure for positron emission tomography. Scientific Data, 9(1), 1-7. Artikel 65. https://doi.org/10.1038/s41597-022-01164-1

Norgaard, M, Matheson, GJ, Hansen, HD, Thomas, A, Searle, G, Rizzo, G, Veronese, M, Giacomel, A, Yaqub, M, Tonietto, M, Funck, T, Gillman, A, Boniface, H, Routier, A, Dalenberg, JR, Betthauser, T, Feingold, F, Markiewicz, CJ, Gorgolewski, KJ, Blair, RW, Appelhoff, S, Gau, R, Salo, T, Niso, G, Pernet, C, Phillips, C, Oostenveld, R, Gallezot, J-D, Carson, RE, Knudsen, GM, Innis, RB & Ganz, M 2022, 'PET-BIDS, an extension to the brain imaging data structure for positron emission tomography', Scientific Data, bind 9, nr. 1, 65, s. 1-7. https://doi.org/10.1038/s41597-022-01164-1

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abstract = "The Brain Imaging Data Structure (BIDS) is a standard for organizing and describing neuroimaging datasets, serving not only to facilitate the process of data sharing and aggregation, but also to simplify the application and development of new methods and software for working with neuroimaging data. Here, we present an extension of BIDS to include positron emission tomography (PET) data, also known as PET-BIDS, and share several open-access datasets curated following PET-BIDS along with tools for conversion, validation and analysis of PET-BIDS datasets.",

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doi = "10.1038/s41597-022-01164-1",

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AU - Norgaard, Martin

AU - Matheson, Granville J

AU - Hansen, Hanne D

AU - Thomas, Adam

AU - Searle, Graham

AU - Rizzo, Gaia

AU - Veronese, Mattia

AU - Giacomel, Alessio

AU - Yaqub, Maqsood

AU - Tonietto, Matteo

AU - Funck, Thomas

AU - Gillman, Ashley

AU - Boniface, Hugo

AU - Routier, Alexandre

AU - Dalenberg, Jelle R

AU - Betthauser, Tobey

AU - Feingold, Franklin

AU - Markiewicz, Christopher J

AU - Gorgolewski, Krzysztof J

AU - Blair, Ross W

AU - Appelhoff, Stefan

AU - Gau, Remi

AU - Salo, Taylor

AU - Niso, Guiomar

AU - Pernet, Cyril

AU - Phillips, Christophe

AU - Oostenveld, Robert

AU - Gallezot, Jean-Dominique

AU - Carson, Richard E

AU - Knudsen, Gitte M

AU - Innis, Robert B

AU - Ganz, Melanie

PY - 2022/3/2

Y1 - 2022/3/2

N2 - The Brain Imaging Data Structure (BIDS) is a standard for organizing and describing neuroimaging datasets, serving not only to facilitate the process of data sharing and aggregation, but also to simplify the application and development of new methods and software for working with neuroimaging data. Here, we present an extension of BIDS to include positron emission tomography (PET) data, also known as PET-BIDS, and share several open-access datasets curated following PET-BIDS along with tools for conversion, validation and analysis of PET-BIDS datasets.

AB - The Brain Imaging Data Structure (BIDS) is a standard for organizing and describing neuroimaging datasets, serving not only to facilitate the process of data sharing and aggregation, but also to simplify the application and development of new methods and software for working with neuroimaging data. Here, we present an extension of BIDS to include positron emission tomography (PET) data, also known as PET-BIDS, and share several open-access datasets curated following PET-BIDS along with tools for conversion, validation and analysis of PET-BIDS datasets.

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PET-BIDS, an extension to the brain imaging data structure for positron emission tomography

Abstract

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