Integrative analysis of histone ChIP-seq and transcription data using Bayesian mixture models

Hans-Ulrich Klein, Martin Schäfer, Bo T Porse, Marie S Hasemann, Katja Ickstadt, Martin Dugas

    29 Citationer (Scopus)

    Abstract

    Histone modifications are a key epigenetic mechanism to activate or repress the transcription of genes. Datasets of matched transcription data and histone modification data obtained by ChIP-seq exist, but methods for integrative analysis of both data types are still rare. Here, we present a novel bioinformatics approach to detect genes that show different transcript abundances between two conditions putatively caused by alterations in histone modification.
    OriginalsprogEngelsk
    TidsskriftBioinformatics
    Vol/bind30
    Udgave nummer8
    Sider (fra-til)1154-62
    ISSN1367-4803
    DOI
    StatusUdgivet - 22 jan. 2014

    Fingeraftryk

    Dyk ned i forskningsemnerne om 'Integrative analysis of histone ChIP-seq and transcription data using Bayesian mixture models'. Sammen danner de et unikt fingeraftryk.

    Citationsformater